Request ID: m0420098387148https://mulan.dcode.org/


Dynamic visualization:

Transcription factor binding sites conserved across all the species:
submit Mulan alignment to multiTF

Pairwise dynamic plots:
  seq1_seq2  

Dot-plots:
  seq1_seq2  

Update annotation:
editanno1anno2
sequence titles

Results & output files:
Mulan alignment file with being the base sequence ::  
tba.maf (26.7 kb) :: final TBA multiple alignment file (blasz textual format)
Phylogenetic tree :: evolutionary relationship among the sequences
refine.fasta (175.2 kb) :: intermediate multiple alignment file (FASTA format)

  pairwise data   list of ECRs  blast-type alignment  blastz alignment 
seq1_seq2detect ECRsseq1_seq2.blastseq1_seq2.blastz

Input files:
 sequence  seq. masked  repeats  annotation 
1seq1.faseq1.txtseq1.repsanno1.txt
2seq2.faseq2.txtseq2.repsanno2.txt
Contact dcode@ncbi.nlm.nih.gov if you have any questions or suggestions